DECIPHER is excellent at quickly align thousands of input sequences while maintaining high accuracy. The examples below illustrate how to achieve excellent performance and scalability in a variety of common alignment scenarios:
Align Sequences - Accurately align thousands of unaligned DNA, RNA, or amino acid (AA) sequences.
Align Translation - Using a set of protein coding sequences, create a nucleotide or amino acid alignment by aligning their corresponding proteins.
Align Synteny - Beginning from completed or draft genomes, find shared syntenic regions and align them quickly while accounting for inversions, rearrangements, and duplications.
Align Profiles - Efficiently create a merged alignment from two sub-alignments that may contain millions of sequences.